Peine, John Douglas. Ecosystem Management for Sustainability : Principles and Practices Illustrated by a Regional Biosphere Reserve Cooperative. Boca Raton: Lewis Publishers, 1999.

Hinote, Hubert. "Framework for Integrated Ecosystem Management: The Southern Appalachian Man." In Ecosystem Management: Principles and Practices Illustrated by a Regional Biosphere Reserve Cooperative, edited by John Douglas Peine, 81-98. Boca Raton, FL: CRC Press, 1998.

Clark, Joseph D., and Michael R. Pelton. "Management of a Large Carnivore: Black Bear." In Ecosystem Management: Principles and Practices Illustrated by a Regional Biosphere Reserve Cooperative, edited by John Douglas Peine, 209-223. Boca Reton, FL: CRC Press, 1998.

White, Peter S., and R. Sutter. "Southern Appalachian Grassy Balds: Lessons for Management and Regional Conservation." In Ecosystem Management: Principles and Practices Illustrated by a Regional Biosphere Cooperative, edited by John Douglas Peine, 375-396. Boca Raton, FL: CRC Press, 1998.

Lucash, Christopher F., Barron Allen Crawford, and Joseph D. Clark. "Species Repatriation: Red Wolf." In Ecosystem Management: Principles and Practices Illustrated by a Regional Biosphere Reserve Cooperative, edited by John Douglas Peine, 225-246. Boca Raton, FL: CRC Press, 1998.

Peine, John Douglas, J. C. Randolph, and James J. Presswood. "Evaluating the Effectiveness of Air Quality Management within the Class I Area of Great Smoky Mountains National Park." Environmental Management 19, no. 4 (1995): 515-526.

Peine, John Douglas. SAMAB Sponsored Project to Define Sustainable Development Strategies for Communities with Tourism Based Economies in the Southern Appalachians In Third Annual Southern Appalachian Man and the Biosphere Conference. Gatlinburg, TN: Tennessee Valley Authority, 1992.

Hinote, Hubert, and John Douglas Peine. Sustainable Development Strategies for Communities with Tourism-Based Economics in the Southern Southern Appalachian Highlands In First Annual Southern Appalachian Man and the Biosphere Conference. Gatlinburg, TN: Tennessee Valley Authority, 1990.

Van Cleave, Rebecca L., William G. Beard, Brian Shunamon, and John Douglas Peine. Trail Use Monitoring in Great Smoky Mountains National Park: Results from 1988, 1989, and 1990 In Research/Resources Management Report. Atlanta, GA: National Park Service - Southeast Region, 1990.

Peine, John Douglas, and Jane Allen Farmer. Wild Hog Management Program at Great Smoky Mountains National Park In Proceedings of the Fourteenth Vertebrate Pest Conference., 1990.

Peine, John Douglas. "Managing the Great Smoky Mountains National Park Biosphere Reserve for Biological Diversity." In Second US-USSR Symposium on Air Pollution Effects on Vegetation, 173-179. Great Smoky Mountains National Park, 1989.

Peine, John Douglas, and James R. Renfro. Visitor Use Patterns at Great Smoky Mountains National Park In Research/Resources Management Report. Gatlinburg, TN: Uplands Field Research Laboratory, 1988.

Wathen, William Gregory, Christopher C. Eagar, Charles E. Noseworthy, John Douglas Peine, and Peter S. White. The Wild Hog Research Program in Great Smoky Mountains National Park In Conference on Science in the National Parks. WR 208 ed. Vol. 4. George Wright Society, 1986.

Peine, John Douglas, Charlotte Pyle, and Peter S. White. Environmental Monitoring and Baseline Data Management Strategies and the Focus of Future Research in Great Smoky Mountains National Park In Research/Resources Management Report. Atlanta, GA: U.S. Department of Interior, National Park Service, Southeast Region, 1985.

Peine, John Douglas. John Peine Collection, 1982-1990 In John Peine Collection. Knoxville, TN: University of Tennessee Libraries, Special Collections, 1985.

Peine, John Douglas, Craig A. Walker, Paul H. Motts, and William E. Hammitt. Evaluating Communications With Visitors to Great Smoky Mountains National Park In Research/Resources Management Report. Gatlinburg, TN: U.S. Department of the Interior, National Park Service, 1984.