Parks, Amanda M., Michael A. Jenkins, Michael E. Ostry, Peng Zhao, and Keith E. Woeste. "Biotic and Abiotic Factors Affecting the Genetic Structure and Diversity of Butternut in the Southern Appalachian Mountains, USA." Tree Genetics & Genomes 10 (2014): 541-554.

Parks, Amanda M., Michael A. Jenkins, Keith E. Woeste, and Michael E. Ostry. "Conservation Status of a Threatened Tree Species: Establishing a Baseline for Restoration of Juglans cinerea L. in the Southern Appalachian Mountains, USA." Natural Areas Journal 33, no. 4 (2013): 413-426.

Webster, Christopher R., and Michael A. Jenkins. "Evidence of Long and Discontinuous Juvenile Periods in Trillium catesbaei Under Contrasting Levels of Herbivory." Botany Published Online (2013).

Stehn, Sarah E., Michael A. Jenkins, Christopher R. Webster, and Shibu Jose. "Regeneration responses to exogenous disturbance gradients in southern Appalachian Picea-Abies forests." Forest Ecology and Management 289 (2013): 98-105.

Bardhan, Sougata, Shibu Jose, Michael A. Jenkins, Christopher R. Webster, Ranjith P. Udawatta, and Sarah E. Stehn. "Microbial community diversity and composition across a gradient of soil acidity in spruce-fir forests of the southern Appalachian Mountains." Applied Soil Ecology 61 (2012): 60-68.

Krapfl, Kurt J., Eric J. Holzmueller, and Michael A. Jenkins. "Understory Composition of Five Tsuga canadensis Associated Forest Communities in Great Smoky Mountains National Park." Natural Areas Journal 32, no. 3 (2012): 260-269.

Krapfl, Kurt J., Eric J. Holzmueller, and Michael A. Jenkins. "Early Impacts of Hemlock Woolly Adelgid in Tsuga Canadensis Forest Communities of the Southern Appalachian Mountains." Journal of the Torrey Botanical                        Society 138, no. 1 (2011): 93-106.

Stehn, Sarah E., Christopher R. Webster, Michael A. Jenkins, and Shibu Jose. "High-elevation Ground-layer Plant Community Composition Across Environmental Gradients in Spruce-Fir Forests." Ecological Research 26, no. 6 (2011): 1089-1101.

Parks, Amanda M., Michael A. Jenkins, Keith E. Woeste, and Michael E. Ostry. Recruitment History, Current Health and Conservation Genetics of Butternut (Juglans cinerea) Populations in Great Smoky Mountains National Park. Department of Forestry and Natural Resources, Purdue University, 2011.

Jenkins, Michael A., Robert N. Klein, and Virginia L. McDaniel. "Yellow pine regeneration as a function of fire severity and post-burn stand structure in the southern Appalachian Mountains." Forest Ecology and Management 262 (2011): 681-691.

Stehn, Sarah E., Christopher R. Webster, Janice M. Glime, and Michael A. Jenkins. "Altitudinal Gradients of Bryophyte Diversity and Community Assemblage in Southern Appalachian Spruce-Fir Forests." In Proceedings from the Conference on the Ecology and Management of High-Elevation Forests in the Central and Southern Appalachian Mountains, edited by James S. Rentch and Thomas M. Schuler, 226. Newtown, PA: U.S. Department of Agriculture, Forest Service, Northern Research, 2010.

Bunn, Windy A., Michael A. Jenkins, Claire B. Brown, and Nathan J. Sanders. "Change Within and Among Forest Communities: The Influence of Historic Disturbance, Environmental Gradients, and Community Attributes." Ecography 33, no. 3 (2010): 425-434.

Stehn, Sarah E., Christopher R. Webster, Janice M. Glime, and Michael A. Jenkins. "Elevational Gradients of Bryophyte Diversity, Life Forms, and Community Assemblage in the Southern Appalachian Mountains." Canadian Journal of Forest Research 40, no. 11 (2010): 2164-2174.

Stehn, Sarah E., Christopher R. Webster, Janice M. Glime, and Michael A. Jenkins. "Ground-layer Bryophyte Communities of Post-adelgid Picea-Abies Forests." Southeastern Naturalist 9, no. 3 (2010): 435-452.

Jenkins, Michael A., and Kristine D. Johnson. "Exotic Plant Species Invasion and Control in Great Smoky Mountains National Park, USA." In Invasive Plant and Forest Ecosystems, 295-322. New York: CRC Press, 2009.

Thiemann, Jennifer A., Christopher R. Webster, Michael A. Jenkins, Peter M. Hurley, Janet H. Rock, and Peter S. White. "Herbaceous-Layer Impoverishment in a Post-Agricultural Southern Appalachian Landscape." American Midland Naturalist 162, no. 1 (2009): 148-168.

Holzmueller, Eric J., Shibu Jose, and Michael A. Jenkins. "The Response of Understory Species Composition, Diversity, and Seedling Regeneration to Repeated Burning in Southern Appalachian Oak-Hickory Forests." Natural Areas Journal 29, no. 3 (2009): 255-262.

Jenkins, Michael A., and Christopher R. Webster. "Spatial Patterning and Population Structure of a Common Woodland Herb, Trillium erectum, in Primary and Post-Logging Secondary Forests." Forest Ecology and Management 258, no. 11 (2009): 2569-2577.

Webster, Christopher R., and Michael A. Jenkins. "Age Structure and Spatial Patterning of Trillium Populations in Old-Growth Forests." Plant Ecology 199, no. 1 (2008): 43-54.

Webster, Christopher R., Janet H. Rock, Robert E. Froese, and Michael A. Jenkins. "Drought-herbivory Interaction Disrupts Competitive Displacement of Native Plants by Microstegium vimineum, 10-year Results." Oecologia (Berlin) 157, no. 3 (2008): 497-508.

Holzmueller, Eric J., Shibu Jose, and Michael A. Jenkins. "The Relationship Between Fire History and an Exotic Fungal Disease in a Deciduous Forest." Oecologia 155, no. 2 (2008): 347-356.

Jenkins, Michael A., Christopher R. Webster, and Janet H. Rock. "Effects of Chronic Herbivory and Historic Land Use on Population Structure of a Forest Perennial, Trillium catesbaei." Applied Vegetation Science 10, no. 3 (2007): 441-450.

Jenkins, Michael A., Christopher R. Webster, and Janet H. Rock. "Effects of Chronic Herbivory and Historic Land Use on Population Structure of a Forest Perennial, Trillium catesbaei." Applied Vegetation Science 10, no. 3 (2007): 441-450.

Jenkins, Michael A., Shibu Jose, and Peter S. White. "Impacts of an Exotic Disease and Vegetation Change on Foliar Calcium Cycling in Appalachian Forests." Ecological Applications 17, no. 3 (2007): 869-881.

Holzmueller, Eric J., Shibu Jose, and Michael A. Jenkins. "Relationship Between Cornus florida L. and Calcium Mineralization in Two Southern Appalachian Forest Types." Forest Ecology and Management 245, no. 1?3 (2007): 110-117.

Jenkins, Michael A.. Thematic Accuracy Assessment: Great Smoky Mountains National Park Vegetation Map. Great Smoky Mountains National Park, Gatlinburg, TN: National Park Service, 2007.

Jenkins, Michael A.. "Vegetation Communities of Great Smoky Mountains National Park." Southeastern Naturalist 6, no. sp2 (2007): 35-56.

Holzmueller, Eric J., Shibu Jose, Michael A. Jenkins, Ann Camp, and Alan Long. "Dogwood Anthracnose in Eastern Hardwood Forests: What Is Known and What Can Be Done?" Journal of Forestry 104, no. 1 (2006): 21-26.

Holzmueller, Eric J., Shibu Jose, and Michael A. Jenkins. The Effect of Fire on Flowering Dogwood Stand Dynamics in Great Smoky Mountains National Park In General Technical Report. Asheville, NC: U.S. Department of Agriculture, Forest Service, Southern Research Station, 2006.

Holzmueller, Eric J., Shibu Jose, and Michael A. Jenkins. "Influence of Calcium, Potassium, and Magnesium on Cornus florida L. Density and Resistance to Dogwood Anthracnose." Plant and Soil 290, no. 1-2 (2006): 189-199.

Kuppinger, Dane M., Peter S. White, and Michael A. Jenkins. Predicting the Invasion of the Exotic Species Paulownia tomentosa Following Burning in Pine and Oak-Pine Forests of the Mountains In Joint Fire Science Project. Chapel Hill, NC: The University of North Carolina, 2006.

Griggs, Jennifer A., Janet H. Rock, Christopher R. Webster, and Michael A. Jenkins. "Vegetative Legacy of a Protected Deer Herd in Cades Cove, Great Smoky Mountains National Park." Natrual Areas Journal 26, no. 2 (2006): 126-136.

Webster, Christopher R., Michael A. Jenkins, and Shibu Jose. "Woody Invaders and the Challenges They Pose to Forest Ecosystems in the Eastern United States." Journal of Forestry 104, no. 7 (2006): 366-374.

Webster, Christopher R., and Michael A. Jenkins. "Coarse Woody Debris Dynamics in the Southern Appalachians as Affected by Topographic Position and Anthropogenic Disturbance History." Forest Ecology and Management 217, no. 2-3 (2005): 319-330.

Webster, Christopher R., Michael A. Jenkins, and Janet H. Rock. "Long-Term Response of Spring Flora to Chronic Herbivory and Deer Exclusion in Great Smoky Mountains National Park, USA." Biological Conservation 125, no. 3 (2005): 297-307.

Webster, Christopher R., Michael A. Jenkins, and Janet H. Rock. "Twenty Years of Forest Change in the Woodlots of Cades Cove, Great Smoky Mountains National Park." Journal of the Torrey Botanical Society 132, no. 2 (2005): 280-292.

Jenkins, Michael A.. "Impact of the Balsam Woolly Adelgid (Adelges piceae Ratz.) on an Abies fraseri (Pursh) Poir. Dominated Stand near the Summit of Mount LeConte, Tennessee." Castanea 68, no. 2 (2003): 109-118.

Jenkins, Michael A., and Pete Biggam. "Soils Inventory Unearths New Species at Great Smoky Mountains National Park." In Natural Resource Year in Review - 2002: A Portrait of the Year in Natural Resource Stewardship and Science in the National Park System, edited by Natural Resource Information Division, 25. Washington, D.C.: National Park Service, 2003.

Jenkins, Michael A., and Peter S. White. "Cornus florida L. Mortality and Understory Composition Changes in Western Great Smoky Mountains National Park." Journal of the Torrey Botanical Society 129, no. 3 (2002): 194-206.

Jenkins, Michael A.. "Vegetation and Ecology of the ATBI Plots." ATBI Quarterly 2, no. 3 (2001): 6-7.